Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ initialize_mpicomm: enabled MPI WARNING: run: quad precision suppressed! SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. 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( ) $Id$ The verbose level is ip= 14 (ldebug= F ) This is a 2-D run nxgrid, nygrid, nzgrid= 64 64 1 Lx, Ly, Lz= 2.5000000000000000 2.5000000000000000 2.5000000000000000 Vbox= 6.2500000000000000 rsnap: read snapshot var.dat in 1.9810300000000001E-004 seconds setup_slices: slice_position = p setup_slices: ix_loc,iy_loc,iz_loc, (video files) = 4 4 4 units_general: unit_velocity= 1.0000000000000000 units_general: unit_density= 1.0000000000000000 units_general: unit_length= 1.0000000000000000 units_general: unit_magnetic= 3.5449077018110318 alpha_fine = 7.2973525643000000E-003 sigma_Thomson_cgs = 6.6524587321600003E-025 Number of reactions= 4 Number of compounds= 2 kreactions_m= 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 kreactions_p= 2.9999999999999999E-002 1.0000000000000000 2.9999999999999999E-002 9.2499999999999999E-002 Sijm: 0.0000000000000000 0.0000000000000000 1.0000000000000000 2.0000000000000000 1.0000000000000000 0.0000000000000000 0.0000000000000000 1.0000000000000000 Sijp: 1.0000000000000000 0.0000000000000000 0.0000000000000000 3.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 stoichio= 1.0000000000000000 0.0000000000000000 -1.0000000000000000 1.0000000000000000 -1.0000000000000000 0.0000000000000000 0.0000000000000000 -1.0000000000000000 WARNING: initialize_chemistry: mu1_full not provided by eos! No string enum for: ;àŽ ;àŽòÿÿÿÿÿ No string enum for: ÷ÿÿ No string enum for: ÿÿÿÿ No string enum for:  463,465c463,465 < override const real AC_kreactions_alpha__mod__chemistry = [0,0,0,0,1.2708680115565635e-76,1.6304166312761136e-322,1.165031456057821e-313,-5.8854876747553526e+18,1.7089792856429906e+97,1.6304166312761136e-322] < override const real AC_kreactions_p__mod__chemistry = [0.029999999999999999,1,0.029999999999999999,0.092499999999999999,5.9978593765008343e-310,1.6304166312761136e-322,6.9291667102517554e-310,0,1.5810100666919889e-322,3.2114266979681025e-322] < override const real AC_kreactions_m__mod__chemistry = [0,0,0,0,2.3715151000379834e-322,2.4209216646221081e-322,5.0444375820301903e+180,2.0264744127495055e+267,1.793261547555029e+209,3.8641037773232373e-144] --- > override const real AC_kreactions_alpha__mod__chemistry = [0,0,0,0,2.3715151000379834e-322,3.2114266979681025e-322,1.7187216350909651e+161,1.1707577171569903e+214,1.5550037480332303e-85,9.7054013494394548e+252] > override const real AC_kreactions_p__mod__chemistry = [0.029999999999999999,1,0.029999999999999999,0.092499999999999999,4.5865688813015766e-310,1.6304166312761136e-322,6.6653061696612668e-310,0,1.5810100666919889e-322,3.2114266979681025e-322] > override const real AC_kreactions_m__mod__chemistry = [0,0,0,0,8.9990141656379635e-308,1.6304166312761136e-322,5.2321832023368561e-310,0,5.2321831759946593e-310,2.4209216646221081e-322] 492c492 < override const int AC_enum_reaction_name__mod__chemistry = [0,0,0,0,539763232,1411394625,49,0,0,0] --- > override const int AC_enum_reaction_name__mod__chemistry = [0,0,0,0,724120104,0,49,0,0,0] acCompile: Loaded different run_const values; recompiling; logging to /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/ac_compilation.log Astaroth warning: was not able to load BASE_FUNC_NAME(acBoundaryCondition) Astaroth warning: was not able to load acGridIntegrate Astaroth warning: was not able to load acGridDiskAccessLaunch Astaroth warning: was not able to load acDeviceStencilAccessesBoundaries Mon Dec 15 12:29:59 2025 : Done setupConfig && acCompile Mon Dec 15 12:29:59 2025 : Check that config is correct Mon Dec 15 12:29:59 2025 : d[xyz]: 0.03906250000000 0.03906250000000 2.50000000000000 Mon Dec 15 12:29:59 2025 : acGridInit: n[xyz]grid: (64,64,1) n[xyz]local (64,64,1) Mon Dec 15 12:29:59 2025 : acGridInit: Calling acDeviceCreate Mon Dec 15 12:30:00 2025 : acGridInit: Returned from acDeviceCreate Mon Dec 15 12:30:00 2025 : acGridInit: Allocated 4 VertexBuffers on the host Mon Dec 15 12:30:00 2025 : acGridInit: decomp: (1,1,1) Mon Dec 15 12:30:00 2025 : acGridInit: Done Mon Dec 15 12:30:00 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:00 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Started autotuning: watch progress in ac_autotuning.log Mon Dec 15 12:30:01 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:01 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:01 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:01 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:01 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:02 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:02 2025 Warning in file /home/pencil/GPU/samples/2d-tests/chemistry_GrayScott/src/astaroth/submodule/src/core/grid.cc line 1866: Unusual task graph {}: - Task graph is empty. Mon Dec 15 12:30:02 2025 : DONE initializeGPU WARNING: run: Pencil consistency check not supported on GPUs. You can consider running it with a CPU-only build! pde: ENTER SVN: ------- v. ( ) $Id$ ---it-------t--------dt-------Y1m-------Y2m---- 0 0.000 1.907E+00 0.917480 0.041260 50 95.367 1.907E+00 0.928563 0.014031 100 190.735 1.907E+00 0.972357 0.008900 150 286.102 1.907E+00 0.965961 0.011281 200 381.470 1.907E+00 0.966281 0.010904 250 476.837 1.907E+00 0.961929 0.012918 300 572.205 1.907E+00 0.953808 0.015591 350 667.572 1.907E+00 0.947258 0.017644 400 762.939 1.907E+00 0.939010 0.020396 450 858.307 1.907E+00 0.930348 0.023331 500 953.674 1.907E+00 0.916409 0.028460 Simulation finished after 501 time-steps Writing final snapshot at time t = 955.58166503906250 Wall clock time [hours] = 8.758E-03 (+/- 2.7778E-13) Wall clock time/timestep/meshpoint [microsec] = 15.36463 Wall clock time/timestep/local meshpoint [microsec] = 15.36463 Rhs wall clock time/timestep/local meshpoint [microsec] = 6.977243 After substep wall clock time/timestep/local meshpoint [microsec] = 0.7878859 Before boundary wall clock time/timestep/local meshpoint [microsec] = 7.515545 Diagnostics wall clock time/timestep/local meshpoint [microsec] = 4.2205387E-02 Timestep wall clock time/timestep/local meshpoint [microsec] = 15.29719 Timestep (without waiting) wall clock time/timestep/local meshpoint [microsec] = 15.29486 Timestep wall clock time/timestep/meshpoint [microsec] = 15.29719 Timestep (without waiting) wall clock time/timestep/meshpoint [microsec] = 15.29486 Diagnostics wall clock time/timestep/meshpoint [microsec] = 4.2205387E-02 Rhs wall clock time/timestep/meshpoint [microsec] = 6.977243 After substep wall clock time/timestep/meshpoint [microsec] = 0.7878859 Before boundary wall clock time/timestep/meshpoint [microsec] = 7.515545 Maximum used memory per cpu [MBytes] = 267.941 Maximum used memory [MBytes] = 267.941 real 314.77 user 209.37 sys 10.67