Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified Authorization required, but no authorization protocol specified SVN: ------- v. ( ) $Id$ read_special_init_pars parameters read... read_special_init_pars parameters parsed... SVN: ------- v. ( ) no cvsid is given i read_special_run_pars parameters read... WARNING: initialize_special: parameter "dataset" overwrites "dataset_type"! read_special_run_pars parameters parsed... SVN: run.in,v v. 1.1 (2021/04/01 11:33:46) joern initialize_mpicomm: enabled MPI WARNING: run: quad precision suppressed! SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ register_special: loading data as double precision register_special: setting parallel HDF5 IO for data file reading register_special: opening datafile data/emftensors.h5 and loading relevant fields into memory... SVN: ------- v. ( ) $Id$ SVN: ------- v. ( ) $Id$ The verbose level is ip= 14 (ldebug= F ) This is a 2-D run nxgrid, nygrid, nzgrid= 40 64 1 Lx, Ly, Lz= 0.30000000000000004 2.6179910000000000 1.5708000000000000 Vbox= 2.6582608153155687 rsnap: read snapshot var.dat in 1.4969300000000000E-004 seconds setup_slices: slice_position = p setup_slices: ix_loc,iy_loc,iz_loc, (video files) = 4 4 4 units_general: unit_velocity= 1.0000000000000000 units_general: unit_density= 1.0000000000000000 units_general: unit_length= 1.0000000000000000 units_general: unit_magnetic= 3.5449077018110318 units_eos: unit_temperature= 4.8108883747190188E-009 units_eos: cp, lnTT0, cs0, pp0, Rgas= 1.0000000000000000 0.40546510810816422 1.0000000000000000 0.59999999999999998 0.40000000000000008 alpha_fine = 7.2973525643000000E-003 sigma_Thomson_cgs = 6.6524587321600003E-025 select_eos_variable: Using lnrho and ss resistivity: constant eta WARNING: initialize_special: x extent 180 in dataset "grid" different from nxgrid! WARNING: initialize_special: y extent 256 in dataset "grid" different from nygrid! At line 2053 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f' At line 2053 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f' At line 2053 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f' Using dataset /emftensor/alpha/mean. At line 2053 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5screate_simple_f' Using dataset /emftensor/beta/mean. Using dataset /emftensor/gamma/mean. Using dataset /emftensor/delta/mean. Using dataset /emftensor/kappa/mean. Using dataset /emftensor/utensor/mean. Using dataset /emftensor/acoef/mean. Using dataset /emftensor/bcoef/mean. Alpha scale: 1.5000000000000000 Alpha components used: | T T T | | T T T | | T T T | Beta scale: 1.0000000000000000 Beta components used: | T T T | | T T T | | T T T | Gamma scale: 1.0000000000000000 Gamma components used: | T T T | Delta scale: 1.0000000000000000 Delta components used: | T T T | Kappa scale: 1.0000000000000000 Kappa components used: | || T T T || || T T T || || T T T || | || T T T || || T T T || || T T T || | || T T T || || T T T || || T T T || | U-mean scale: 1.0000000000000000 U-mean components used: | T T T | acoef scale: 1.0000000000000000 acoef components used: | T T T | | T T T | | T T T | bcoef scale: 1.0000000000000000 bcoef components used: | || T T T || || T T T || || T T T || | || T T T || || T T T || || T T T || | || T T T || || T T T || || T T T || pencil_consistency_check: checking pencil case At line 2260 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2261 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2269 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2270 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2284 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_6' At line 2260 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2261 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2269 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2270 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2260 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2261 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2269 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2270 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2284 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_6' At line 2260 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2261 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2269 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2270 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2284 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_6' At line 2284 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_6' Alpha(1,1) min/max: -6.5287485718727112E-002 6.4101748168468475E-002 Alpha(2,2) min/max: -1.2434650212526321E-002 1.2690497562289238E-002 Alpha(3,3) min/max: -2.0216781646013260E-002 2.0747747272253036E-002 Alpha (rms): 2.8981762635842533E-002 Beta(1,1) min/max: -1.0975253826472908E-004 6.9529359461739659E-004 At line 2176 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2177 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2185 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2186 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2197 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_5' At line 2176 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2177 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2185 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2186 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2197 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_5' At line 2176 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2177 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2185 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2186 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2197 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_5' Beta(2,2) min/max: -3.5094253689749166E-005 6.7426910391077399E-004 Beta(3,3) min/max: -6.3580488151458346E-020 8.8795420015230775E-004 Beta (rms): 1.2403251005069179E-003 At line 2176 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2177 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2185 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2186 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2197 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_5' At line 2344 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2345 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2352 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2353 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2344 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2345 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2352 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2353 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2344 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2345 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2352 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2353 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' Gamma(1) min/max: -1.0334515012800694E-002 8.9865848422050476E-003 Gamma(2) min/max: -7.6528657227754593E-003 7.3652607388794422E-003 Gamma(3) min/max: -9.4897933304309845E-003 9.1323787346482277E-003 Gamma (rms): 8.6551558238210924E-003 At line 2363 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_7' At line 2363 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_7' Delta(1) min/max: -1.5430695202667266E-004 1.6823856276459992E-004 At line 2363 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_7' Delta(2) min/max: -2.5125656975433230E-004 3.0344448168762028E-004 Delta(3) min/max: -1.3413980195764452E-004 1.2279328075237572E-004 Delta (rms): 1.2881215072652302E-004 At line 2344 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2345 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2352 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'start' of procedure 'h5sselect_hyperslab_f' At line 2353 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'count' of procedure 'h5sselect_hyperslab_f' At line 2363 of file special/meanfield_e_tensor.f90 Fortran runtime warning: An array temporary was created for argument 'dims' of procedure 'h5dread_rkind_8_rank_7' Kappa min/max: -8.9077115990221500E-004 8.7905389955267310E-004 Umean(1) min/max: -1.3105119578540325E-002 2.4402104318141937E-003 Umean(2) min/max: -1.2733181007206440E-002 1.2754739262163639E-002 Umean(3) min/max: -3.6003779619932175E-002 0.21262395381927490 Umean (rms): 1.3412426041711997E-002 Acoef(1,1) min/max: -6.5892703831195831E-002 6.4678139984607697E-002 Acoef(2,2) min/max: -1.2348907999694347E-002 1.2602049857378006E-002 Acoef(3,3) min/max: -2.0216781646013260E-002 2.0747747272253036E-002 Acoef (rms): 3.4432025061348188E-002 Bcoef min/max: -1.3905871892347932E-003 1.7024549888446927E-003 Construct alternative decomposition from raw tensors. pencil_consistency_check: checking requested pencils pencil_consistency_check: performing small pencil check pencil_consistency_check: the small pencil check reported no problems pencil_consistency_check: performing full pencil check (takes a while) pencil_consistency_check: possible overcalculation... pencil graddiva ( 168) is requested, but does not appear to be required! pencil_consistency_check: checking dependence on pencil initialization pencil_consistency_check: results are independent of pencil initialization pencil_consistency_check: checking diagnostics pencils pencil_consistency_check: performing small pencil check pencil_consistency_check: the small pencil check reported no problems pencil_consistency_check: performing full pencil check (takes a while) pencil_consistency_check: set lpencil_check_diagnos_opti=T in run.in to report pencil_consistency_check: optimisation possibilities for diagnostics pencils pencil_consistency_check: checking dependence on pencil initialization pencil_consistency_check: diagnostics are independent of pencil initialization pencil_consistency_check: all tests passed pde: ENTER SVN: ------- v. ( ) $Id$ duu_dt: diagnostics ... daa_dt: SOLVE Bcs for Ax, x: < s:a>, y: < a>, z: < p> Bcs for Ay, x: < spr:nfr>, y: < s>, z: < p> Bcs for Az, x: < spr:nfr>, y: < a>, z: < p> daa_dt: iresistivity=eta-const daa_dt: max(diffus_eta) = 0.90409064421822227 daa_dt: max(diffus_eta2) = 0.0000000000000000 daa_dt: max(diffus_eta3) = 0.0000000000000000 dspecial_dt: SOLVE dspecial_dt ---it--------t---------dt-------brms------bx2m------by2m------bz2m-----jxmax-----jymax-----jzmax-----emfrms---emfcoefrms-emfdiffmax-emfxdiffmax-emfydiffmax-emfzdiffmax-dtemf_ave-dtemf_dif---dteta---alphaxmax-alphaymax-alphazmax--emfxmax---emfymax---emfzmax-- 0 0.000 8.456E-03 2.038E-06 9.487E-14 1.958E-12 2.100E-12 1.565E-04 2.282E-03 2.256E-03 2.187E-07 2.187E-07 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 6.818E-08 7.838E-08 9.122E-08 8.208E-07 1.442E-06 1.279E-06 2 0.017 8.456E-03 1.687E-06 6.785E-14 1.248E-12 1.530E-12 1.487E-04 1.831E-03 1.610E-03 1.342E-07 1.342E-07 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 4.849E-08 6.262E-08 6.767E-08 6.467E-07 3.061E-07 5.169E-07 4 0.034 8.456E-03 1.449E-06 5.360E-14 8.758E-13 1.170E-12 1.413E-04 1.654E-03 1.346E-03 9.384E-08 9.384E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 4.113E-08 5.024E-08 5.999E-08 5.210E-07 1.899E-07 2.401E-07 6 0.051 8.456E-03 1.275E-06 4.466E-14 6.539E-13 9.261E-13 1.343E-04 1.545E-03 1.275E-03 7.115E-08 7.115E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.509E-08 4.049E-08 5.449E-08 4.385E-07 1.440E-07 1.613E-07 8 0.068 8.456E-03 1.140E-06 3.843E-14 5.094E-13 7.526E-13 1.277E-04 1.443E-03 1.210E-03 5.689E-08 5.689E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.384E-08 3.279E-08 4.872E-08 4.041E-07 1.219E-07 1.154E-07 10 0.085 8.456E-03 1.033E-06 3.381E-14 4.094E-13 6.247E-13 1.214E-04 1.349E-03 1.150E-03 4.718E-08 4.718E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.351E-08 2.670E-08 4.321E-08 3.707E-07 1.107E-07 9.768E-08 12 0.101 8.456E-03 9.459E-07 3.022E-14 3.369E-13 5.276E-13 1.178E-04 1.261E-03 1.093E-03 4.017E-08 4.017E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.309E-08 2.319E-08 3.816E-08 3.385E-07 9.946E-08 8.330E-08 14 0.118 8.456E-03 8.729E-07 2.733E-14 2.826E-13 4.521E-13 1.182E-04 1.180E-03 1.041E-03 3.488E-08 3.488E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.256E-08 2.052E-08 3.603E-08 3.077E-07 8.904E-08 7.156E-08 16 0.135 8.456E-03 8.111E-07 2.496E-14 2.407E-13 3.922E-13 1.182E-04 1.104E-03 9.923E-04 3.077E-08 3.077E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.191E-08 1.810E-08 3.411E-08 2.787E-07 8.160E-08 6.189E-08 18 0.152 8.456E-03 7.580E-07 2.296E-14 2.078E-13 3.438E-13 1.212E-04 1.033E-03 9.469E-04 2.749E-08 2.749E-08 0.000E+00 0.000E+00 0.000E+00 0.000E+00 1.867E-01 9.878E-01 2.548E-02 3.116E-08 1.703E-08 3.223E-08 2.515E-07 8.003E-08 5.389E-08 Simulation finished after 19 time-steps Writing final snapshot at time t = 0.16065760407096408 Wall clock time [hours] = 1.325E-05 (+/- 2.7778E-13) Wall clock time/timestep/meshpoint [microsec] = 0.9809668 Wall clock time/timestep/local meshpoint [microsec] = 3.923867 Rhs wall clock time/timestep/local meshpoint [microsec] = 47.19606 Maximum used memory per cpu [MBytes] = 40.629 Maximum used memory [MBytes] = 161.609 real 0.97 user 2.66 sys 0.12